Metropolis Importance Sampling for Rugged Dynamical Variables
arXiv:cond-mat/0209413 · doi:10.1103/PhysRevLett.90.180601
Abstract
A funnel transformation is introduced, which acts recursively from higher towards lower temperatures. It biases the a-priori probabilities of a canonical or generalized ensemble Metropolis simulation, so that they zoom in on the global energy minimum, if a funnel exists indeed. A first, crude approximation to the full transformation, called rugged Metropolis one (RM$_1$), is tested for Met-Enkephalin. At 300$ $K the computational gain is a factor of two and, due to its simplicity, RM$_1$ is well suited to replace the conventional Metropolis updating for these kind of systems.
4 pages RevTex, 2 figures, 1 table. Revised after referee repots, 400K acceptance rates corrected