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papers

Publications (42)

q-bio.PE2018

Bet-hedging strategies in expanding populations

Paula Villa Martín, Miguel A. Muñoz, Simone Pigolotti

q-bio.SC2016

Protocols for copying and proofreading in template-assisted polymerization

Simone Pigolotti, Pablo Sartori

q-bio.PE2014

Analysis of self-overlap reveals trade-offs in plankton swimming trajectories

Giuseppe Bianco, Patrizio Mariani, Andre W. Visser +2

q-bio.PE2007

Species clustering in competitive Lotka-Volterra models

Simone Pigolotti, Cristobal Lopez, Emilio Hernandez-Garcia

cond-mat.stat-mech2018

Arcsine Laws in Stochastic Thermodynamics

Andre C. Barato, Édgar Roldán, Ignacio A. Martínez +1

q-bio.SC2015

Thermodynamics of Error Correction

Pablo Sartori, Simone Pigolotti

cond-mat.stat-mech2017

Generic Properties of Stochastic Entropy Production

Simone Pigolotti, Izaak Neri, Édgar Roldán +1

physics.data-an2015

Numerical and experimental study of the effects of noise on the permutation entropy

C. Quintero-Quiroz, Simone Pigolotti, M. C. Torrent +1

nlin.CD2005

Boltzmann entropy and chaos in a large assembly of weakly interacting systems

Massimo Falcioni, Luigi Palatella, Simone Pigolotti +2

q-bio.PE2004

A Stochastic Model for the Species Abundance Problem in an Ecological Community

Simone Pigolotti, Alessandro Flammini, Amos Maritan

q-bio.PE2013

Species abundances and lifetimes: from neutral to niche-stabilized communities

Simone Pigolotti, Massimo Cencini

cs.GT2013

Replicator dynamics with turnover of players

Jeppe Juul, Ardeshir Kianercy, Sebastian Bernhardsson +1

cond-mat.soft2008

Coarse graining of master equations with fast and slow states

Simone Pigolotti, Angelo Vulpiani

q-bio.PE2016

Competition between fast- and slow-diffusing species in non-homogeneous environments

Simone Pigolotti, Roberto Benzi

q-bio.CB2012

Quality Control System Response to Stochastic Growth of Amyloid Fibrils

Simone Pigolotti, Ludvig Lizana, Daniel Otzen +1

nlin.CD2006

Absorbing processes in Richardson diffusion: analytical results

Simone Pigolotti, Mogens H. Jensen, Angelo Vulpiani

q-bio.PE2009

How Gaussian competition leads to lumpy or uniform species distributions

Simone Pigolotti, Cristobal Lopez, Emilio Hernandez-Garcia +1

cs.GT2012

Equilibrium strategy and population-size effects in lowest unique bid auctions

Simone Pigolotti, Sebastian Bernhardsson, Jeppe Juul +2

q-bio.PE2009

Speciation-rate dependence in species-area relationships

Simone Pigolotti, Massimo Cencini

q-bio.PE2015

Stochasticity enhances the gaining of bet-hedging strategies in contact-process-like dynamics

Jorge Hidalgo, Simone Pigolotti, Miguel A. Munoz

q-bio.PE2012

What ecological factors shape species-area curves in neutral models?

Massimo Cencini, Simone Pigolotti, Miguel A. Muñoz

q-bio.PE2009

Species competition: coexistence, exclusion and clustering

Emilio Hernandez-Garcia, Cristobal Lopez, Simone Pigolotti +1

q-bio.MN2015

Inherent directionality explains the lack of feedback loops in empirical networks

Virginia Domínguez-García, Simone Pigolotti, Miguel A. Muñoz

nlin.CD2005

Properties making a chaotic system a good Pseudo Random Number Generator

Massimo Falcioni, Luigi Palatella, Simone Pigolotti +1

q-bio.PE2010

Coexistence and invasibility in a two-species competition model with habitat-preference

Simone Pigolotti, Massimo Cencini

q-bio.PE2014

Selective advantage of diffusing faster

Simone Pigolotti, Roberto Benzi

q-bio.MN2006

Oscillation patterns in negative feedback loops

Simone Pigolotti, Sandeep Krishna, Mogens H. Jensen

q-bio.PE2012

Population dynamics in compressible flows

Roberto Benzi, Mogens H. Jensen, David R. Nelson +3

nlin.CD2009

The Repressor-Lattice: Feed-Back, Commensurability, and Dynamical Frustration

Mogens H. Jensen, Sandeep Krishna, Simone Pigolotti

q-bio.PE2012

Growth, competition and cooperation in spatial population genetics

Simone Pigolotti, Roberto Benzi, Prasad Perlekar Mogens H. Jensen +2

cond-mat.stat-mech2018

Mapping of uncertainty relations between continuous and discrete time

Davide Chiuchiù, Simone Pigolotti

stat.ME2010

Self-consistent method for density estimation

Alberto Bernacchia, Simone Pigolotti

nlin.CD2007

Macroscopic equations for the adiabatic piston

Massimo Cencini, Luigi Palatella, Simone Pigolotti +1

q-bio.PE2011

Population genetics in compressible flows

Simone Pigolotti, Roberto Benzi, Mogens H. Jensen +1

q-bio.SC2019

Error-speed correlations in biopolymer synthesis

Davide Chiuchiú, Yuhai Tu, Simone Pigolotti

physics.bio-ph2009

Stop-and-go kinetics in amyloid fibrillation

Jesper Fonslet, Christian Beyschau Andersen, Sandeep Krishna +6

q-bio.SC2013

Kinetic vs. energetic discrimination in biological copying

Pablo Sartori, Simone Pigolotti

q-bio.QM2009

Symbolic dynamics of biological feedback networks

Simone Pigolotti, Sandeep Krishna, Mogens H. Jensen

q-bio.PE2017

Stochastic spatial models in ecology: a statistical physics approach

Simone Pigolotti, Massimo Cencini, Daniel Molina +1

q-bio.MN2012

Switching between oscillations and homeostasis in competing negative and positive feedback motifs

Weihan Li, Sandeep Krishna, Simone Pigolotti +2

cond-mat.stat-mech2009

Statistics of trajectories in two-state master equations

Andrew D. Jackson, Simone Pigolotti

q-bio.BM2017

Energetic funnel facilitates facilitated diffusion

Massimo Cencini, Simone Pigolotti