Publications (41)
RNA Base Pairing Determines the Conformations of RNA Inside Spherical Viruses
Gonca Erdemci-Tandogan, Henri Orland, Roya Zandi
What drives the translocation of stiff chains?
Roya Zandi, David Reguera, Joseph Rudnick +1
Elasticity in Curved Topographies: Exact Theories and Linear Approximations
Siyu Li, Roya Zandi, Alex Travesset
Why large icosahedral viruses need scaffolding proteins: The interplay of Gaussian curvature and disclination interactions
Siyu Li, Polly Roy, Alex Travesset +1
Role of Genome in the Formation of Conical Retroviral Shells
Gonca Erdemci-Tandogan, Jef Wagner, Paul van der Schoot +1
Effect of Curvature and Confinement on the Casimir-Polder Interaction
Pablo Rodriguez-Lopez, Thorsten Emig, Ehsan Noruzifar +1
Boundary conditions and the critical Casimir force on an Ising model film: exact results in one and two dimensions
Roya Zandi, Joseph Rudnick, Aviva Shackell +1
Calculating Casimir interactions for Periodic Surface Relief Gratings using the C-Method
Jef Wagner, Roya Zandi
Viral self-assembly as a thermodynamic process
Robijn F. Bruinsma, William M. Gelbart, David Reguera +2
Self Consistent Field Theory of Virus Assembly
Siyu Li, Henri Orland, Roya Zandi
Attachment and detachment rate distributions in deep-bed filtration
Hsiang-Ku Lin, Leonid P. Pryadko, Sharon Walker +1
A novel minimal in vitro system for analyzing HIV-1 Gag mediated budding
Dong Gui, Sharad Gupta, Jun Xu +5
The effect of RNA stiffness on the self-assembly of virus particles
Siyu Li, Gonca Erdemci-Tandogan, Paul van der Schoot +1
Probing Polyelectrolyte Elasticity Using Radial Distribution Function
Roya Zandi, Joseph Rudnick, Ramin Golestanian
Entropic competition between knots and slip-links
Roya Zandi, Yacov Kantor, Mehran Kardar
The equilibrium structure of self-assembled protein nano-cages
Sanaz Panahandeh, Siyu Li, Roya Zandi
Mechanical Properties of Viral Capsids
Roya Zandi, David Reguera
Radial Distribution Function of Rodlike Polyelectrolytes
Roya Zandi, Joseph Rudnick, Ramin Golestanian
Effects of RNA branching on the electrostatic stabilization of viruses
Gonca Erdemci-Tandogan, Jef Wagner, Paul van der Schoot +2
Quantum and thermal Casimir interaction between a sphere and a plate: Comparison of Drude and plasma models
Roya Zandi, Thorsten Emig, Umar Mohideen
RNA topology remolds electrostatic stabilization of viruses
Gonca Erdemci-Tandogan, Jef Wagner, Paul van der Schoot +2
Collective charge fluctuations and Casimir interactions for quasi one-dimensional metals
Ehsan Noruzifar, Thorsten Emig, Umar Mohideen +1
Impact of a non-uniform charge distribution on virus assembly
Siyu Li, Gonca Erdemci-Tandogan, Jef Wagner +2
Thinning of superfluid films below the critical point
Roya Zandi, Aviva Shackell, Joseph Rudnick +2
Adsorption of annealed branched polymers on curved surfaces
Jef Wagner, Gonca Erdemci-Tandogan, Roya Zandi
Thermodynamics of nano-spheres encapsulated in virus capsids
Antonio Siber, Roya Zandi, Rudolf Podgornik
Apex Exponents for Polymer--Probe Interactions
Michael Slutsky, Roya Zandi, Yacov Kantor +1
Impact of Charge Variation on the Encapsulation of Nanoparticles by Virus Coat Proteins
Hsiang-Ku Lin, Paul van der Schoot, Roya Zandi
Anomalous Buckling of Charged Rods
Roya Zandi, Ramin Golestanian, Joseph Rudnick
In vitro protease cleavage and computer simulations reveal the HIV-1 capsid maturation pathway
Jiying Ning, Gonca Erdemci-Tandogan, Ernest L Yufenyuy +6
Energetically favoured defects in dense packings of particles on spherical surfaces
Stefan Paquay, Halim Kusumaatmaja, David J. Wales +2
Fluctuation-induced forces between inclusions in a fluid membrane under tension
Hsiang-Ku Lin, Roya Zandi, Umar Mohideen +1
Contact Mechanics of a Small Icosahedral Virus
Cheng Zeng, Mercedes Hernando-Pérez, Xiang Ma +3
Recent advances in coarse-grained modeling of virus assembly
Michael F. Hagan, Roya Zandi
The robust assembly of small symmetric nano-shells
Jef Wagner, Roya Zandi
Constraints, Histones, and the 30 Nanometer Spiral
Roya Zandi, Joseph Rudnick
Scattering Approach for Fluctuation--Induced Interactions at Fluid Interfaces
Ehsan Noruzifar, Jef Wagner, Roya Zandi
Universality versus material dependence of fluctuation forces between metallic wires
Ehsan Noruzifar, Thorsten Emig, Roya Zandi
Casimir forces, surface fluctuations, and thinning of superfluid films
Roya Zandi, Joseph Rudnick, Mehran Kardar
Functional analysis of the N-terminal basic motif of a eukaryotic satellite RNA virus capsid protein in replication and packaging
Venkatesh Sivanandam, Deborah Mathews, Rees Garmann +3
Anomalous bending of a polyelectrolyte
Roya Zandi, Joseph Rudnick, Ramin Golestanian