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papers

Publications (82)

cond-mat.stat-mech2011

Avalanche Spatial Structure and Multivariable Scaling Functions; Sizes, Heights, Widths, and Views through Windows

Yan-Jiun Chen, Stefanos Papanikolaou, James P. Sethna +2

cond-mat1995

Avalanches, Barkhausen Noise, and Plain Old Criticality

Olga Perković, Karin Dahmen, James P. Sethna

cond-mat.stat-mech2013

Scaling theory of continuum dislocation dynamics in three dimensions: Self-organized fractal pattern formation

Yong S. Chen, Woosong Choi, Stefanos Papanikolaou +2

cond-mat.stat-mech2013

Parameter Space Compression Underlies Emergent Theories and Predictive Models

Benjamin B. Machta, Ricky Chachra, Mark K. Transtrum +1

cond-mat.mes-hall2008

Anomalous Conductance Oscillations and Half-Metallicity in Atomic Ag-O Chains

Mikkel Strange, Kristian S. Thygesen, James P. Sethna +1

cond-mat.mtrl-sci1996

Improved Magnetic Information Storage using Return-Point Memory

Olga Perkovic, James P. Sethna

q-bio.QM2007

Extracting falsifiable predictions from sloppy models

Ryan N. Gutenkunst, Fergal P. Casey, Joshua J. Waterfall +2

cond-mat.mtrl-sci2001

Formal Considerations about Fracture: Nucleation and Growth

James P. Sethna

q-bio.QM2012

Critical Casimir forces in cellular membranes

Benjamin B. Machta, Sarah L. Veatch, James P. Sethna

math.OC2012

Geodesic acceleration and the small-curvature approximation for nonlinear least squares

Mark K. Transtrum, James P. Sethna

cond-mat.stat-mech2004

Mean field approaches to the totally asymmetric exclusion process with quenched disorder and large particles

Leah B. Shaw, James P. Sethna, Kelvin H. Lee

cond-mat.stat-mech2001

Crackling Noise

James P. Sethna, Karin A. Dahmen, Christopher R. Myers

mtrl-th1996

Microscopic Estimates for Electromigration Velocities of Intragranular Voids in Aluminum Lines

L. K. Wickham, James P. Sethna

cond-mat1992

Logarithmically slow domain growth in nonrandomly frustrated systems: Ising models with competing interactions

Joel D. Shore, Mark Holzer, James P. Sethna

cond-mat.dis-nn1997

Martensitic Tweed and the Two-Way Shape-Memory Effect

James P. Sethna, Christopher R. Myers

q-bio.MN2006

Optimal experimental design in an EGFR signaling and down-regulation model

Fergal P. Casey, Dan Baird, Qiyu Feng +6

physics.comp-ph2012

Is dislocation flow turbulent in deformed crystals?

Woosong Choi, Yong S. Chen, Stefanos Papanikolaou +1

cond-mat.mtrl-sci2000

Dislocation Kinks in Copper: Widths, Barriers, Effective Masses, and Quantum Tunneling

Tejs Vegge, James P. Sethna, Siew-Ann Cheong +3

cond-mat1996

Decay of isolated surface features driven by the Gibbs-Thomson effect in analytic model and simulation

James G. McLean, B. Krishnamachari, D. R. Peale +3

cond-mat.stat-mech2013

Quasi-periodic events in crystal plasticity and the self-organized avalanche oscillator

Stefanos Papanikolaou, Dennis M. Dimiduk, Woosong Choi +4

cond-mat.mtrl-sci2003

Scaling in Plasticity-Induced Cell-Boundary Microstructure: Fragmentation and Rotational Diffusion

James P. Sethna, Valerie R. Coffman, Eugene Demler

cond-mat2003

Meissner Effect and Constraints

James P. Sethna, Ming Huang

cond-mat.dis-nn2007

Stress-free states of continuum dislocation fields: Rotations, grain boundaries, and the Nye dislocation density tensor

Surachate Limkumnerd, James P. Sethna

cond-mat.dis-nn2001

Noise in disordered systems: The power spectrum and dynamic exponents in avalanche models

Matthew C. Kuntz, James P. Sethna

cond-mat1992

Beyond the ``principle of local symmetry'': derivation of a general crack propagation law

Jennifer Hodgdon, James P. Sethna

chao-dyn1995

A Generalization of the Theory of Normal Forms

W. H. Warner, P. R. Sethna, James P. Sethna

cond-mat1993

Hysteresis Loop Critical Exponents in 6-Epsilon Dimensions

Karin Dahmen, James P. Sethna

cond-mat.mtrl-sci1996

Statistical Mechanics of Cracks: Thermodynamic Limit, Fluctuations, Breakdown, and Asymptotics of Elastic Theory

Alex Buchel, James P. Sethna

physics.data-an2012

Improvements to the Levenberg-Marquardt algorithm for nonlinear least-squares minimization

Mark K. Transtrum, James P. Sethna

physics.soc-ph2013

Collective Motion of Moshers at Heavy Metal Concerts

Jesse L. Silverberg, Matthew Bierbaum, James P. Sethna +1

cond-mat.mes-hall2006

Phonons in Molecular Quantum Dots: Density Functional Calculation of Franck-Condon Emission Rates in External Fields

Connie Te-ching Chang, James P. Sethna, Abhay N. Pasupathy +3

cond-mat.stat-mech2015

Sloppiness and Emergent Theories in Physics, Biology, and Beyond

Mark K. Transtrum, Benjamin Machta, Kevin Brown +3

physics.bio-ph2011

Nucleation at the DNA supercoiling transition

Bryan C. Daniels, James P. Sethna

physics.acc-ph2013

Response to comment on theoretical RF field limits of multilayer coating structures of superconducting resonator cavities

Sam Posen, Gianluigi Catelani, Matthias U. Liepe +2

cond-mat1996

Elastic Theory Has Zero Radius of Convergence

Alex Buchel, James P. Sethna

cond-mat1995

Hysteresis, Avalanches, and Disorder Induced Critical Scaling: A Renormalization Group Approach

Karin Dahmen, James P. Sethna

cond-mat.stat-mech1997

Hysteresis, Avalanches, and Barkhausen Noise

James P. Sethna, Olga Perkovic, Karin A. Dahmen

cond-mat.stat-mech2013

Universal scaling function for the two-dimensional Ising model in an external field: A pragmatic approach

Yan-Jiun Chen, Natalie M. Paquette, Benjamin B. Machta +1

cond-mat.supr-con2010

Superheating field of superconductors within Ginzburg-Landau theory

Mark K. Transtrum, Gianluigi Catelani, James P. Sethna

cond-mat.stat-mech2014

Fracture strength: Stress concentration, extreme value statistics and the fate of the Weibull distribution

Zsolt Bertalan, Ashivni Shekhawat, James P. Sethna +1

cond-mat.stat-mech1997

Multicanonical Methods vs. Molecular Dynamics vs. Monte Carlo: Comparison for Lennard-Jones Glasses

Kamal K. Bhattacharya, James P. Sethna

cond-mat.mes-hall2007

Phonon Overlaps: Polyacetylene, Polarons, and Molecular Size

Connie Te-ching Chang, James P. Sethna

cond-mat.stat-mech2001

Universal Pulse Shape Scaling Function and Exponents: A Critical Test for Avalanche Models applied to Barkhausen Noise

Amit P. Mehta, Andrea C. Mills, Karin Dahmen +1

q-bio.BM2009

Discontinuities at the DNA supercoiling transition

Bryan C. Daniels, Scott Forth, Maxim Y. Sheinin +2

cond-mat.mtrl-sci2010

Bending crystals: Emergence of fractal dislocation structures

Yong S. Chen, Woosong Choi, Stefanos Papanikolaou +1

physics.acc-ph2013

Theoretical Field Limits for Multi-Layer Superconductors

Sam Posen, Gianluigi Catelani, Matthias U. Liepe +2

cond-mat.stat-mech2010

The geometry of nonlinear least squares with applications to sloppy models and optimization

Mark K. Transtrum, Benjamin B. Machta, James P. Sethna

chao-dyn1994

Defect--Defect Correlation Functions, Generic Scale Invariance, and the Complex Ginzburg--Landau Equation

Bruce W. Roberts, Eberhard Bodenschatz, James P. Sethna

cond-mat.dis-nn2006

Crackling Noise and Avalanches: Scaling, Critical Phenomena, and the Renormalization Group

James P. Sethna

cond-mat.stat-mech2012

From damage percolation to crack nucleation through finite size criticality

Ashivni Shekhawat, Stefano Zapperi, James P. Sethna

cond-mat1994

Atomic Tunneling from a STM/AFM tip: Dissipative Quantum Effects from Phonons

Ard A. Louis, James P. Sethna

cond-mat1992

Hysteresis and hierarchies: dynamics of disorder-driven first-order phase transformations

James P. Sethna, Karin Dahmen, Sivan Kartha +3

cond-mat.mtrl-sci2008

A comparison of finite element and atomistic modelling of fracture

Valerie R Coffman, James P. Sethna, Gerd Heber +4

cond-mat.stat-mech1997

Zero-temperature Hysteresis in Random-field Ising Model on a Bethe Lattice

Deepak Dhar, Prabodh Shukla, James P. Sethna

cond-mat.mtrl-sci2008

Grain boundary energies and cohesive strength as a function of geometry

Valerie R. Coffman, James P. Sethna

q-bio.MN2004

The statistical mechanics of complex signaling networks : nerve growth factor signaling

Kevin S. Brown, Colin C. Hill, Guillermo A. Calero +3

cond-mat.mtrl-sci1998

Simulations of energetic beam deposition: from picoseconds to seconds

Joachim Jacobsen, B. H. Cooper, James P. Sethna

cond-mat.other2008

Challenges in continuum modeling of intergranular fracture

Valerie R. Coffman, James P. Sethna, Gerd Heber +4

physics.data-an2008

Variational method for estimating the rate of convergence of Markov Chain Monte Carlo algorithms

Fergal P. Casey, Joshua J. Waterfall, Ryan N. Gutenkunst +2

q-bio.QM2007

Universally Sloppy Parameter Sensitivities in Systems Biology

Ryan N. Gutenkunst, Joshua J. Waterfall, Fergal P. Casey +3

cond-mat.stat-mech2006

The sloppy model universality class and the Vandermonde matrix

Joshua J. Waterfall, Fergal P. Casey, Ryan N. Gutenkunst +5

cond-mat2009

Order Parameters, Broken Symmetry, and Topology

James P. Sethna

cond-mat.mtrl-sci2003

Fracture of Notched Single Crystal Silicon

Nicholas P. Bailey, James P. Sethna

cond-mat.mtrl-sci2002

Crack Growth Laws from Symmetry

James P. Sethna

cond-mat.dis-nn1998

Disorder-Induced Critical Phenomena in Hysteresis: Numerical Scaling in Three and Higher Dimensions

Olga Perkovic, Karin A. Dahmen, James P. Sethna

q-bio.PE2010

Adaptive mutation of biochemical reaction constants: Fisher's geometrical model without pleiotropy

Ryan N. Gutenkunst, James P. Sethna

q-bio.QM2008

Sloppiness, robustness, and evolvability in systems biology

Bryan C. Daniels, Yan-Jiun Chen, James P. Sethna +2

cond-mat.mtrl-sci2006

Mesoscale theory of grains and cells: crystal plasticity and coarsening

Surachate Limkumnerd, James P. Sethna

cond-mat1995

Acoustic Emission from crumpling paper

Paul A. Houle, James P. Sethna

cond-mat.mtrl-sci1997

Pulsed sputtering during homoepitaxial surface growth: layer-by-layer forever

Joachim Jacobsen, James P. Sethna

cond-mat.stat-mech2011

Fracture strength of disordered media: Universality, interactions and tail asymptotics

Claudio Manzato, Ashivni Shekhawat, Phani K. V. V. Nukala +3

cond-mat.mes-hall2002

Enhanced mesoscopic fluctuations in the crossover between random matrix ensembles

Shaffique Adam, Piet W. Brouwer, James P. Sethna +1

q-bio.TO2014

Mechanical Properties of Growing Melanocytic Nevi and the Progression to Melanoma

Alessandro Taloni, Alexander A. Alemi, Emilio Ciusani +3

cond-mat1996

Disorder-Induced Critical Phenomena in Hysteresis: A Numerical Scaling Analysis

Olga Perkovic, Karin A. Dahmen, James P. Sethna

q-bio.SC2010

A minimal model of plasma membrane heterogeneity requires coupling cortical actin to criticality

Benjamin B. Machta, Stefanos Papanikolaou, James P. Sethna +1

cond-mat.str-el2011

Dielectric breakdown and avalanches at non-equilibrium metal-insulator transitions

Ashivni Shekhawat, Stefanos Papanikolaou, Stefano Zapperi +1

q-bio.TO2013

Senescent Cells in Growing Tumors: Population Dynamics and Cancer Stem Cells

Caterina A. M. La Porta, Stefano Zapperi, James P. Sethna

cond-mat.mtrl-sci2005

Random-Field Ising Models of Hysteresis

James P. Sethna, Karin A. Dahmen, Olga Perkovic

cond-mat.supr-con2008

Temperature dependence of the superheating field for superconductors in the high-k London limit

G. Catelani, James P. Sethna

cond-mat.mtrl-sci1997

Rate theory for correlated processes: Double-jumps in adatom diffusion

Joachim Jacobsen, Karsten W. Jacobsen, James P. Sethna

cond-mat.dis-nn2010

Beyond power laws: Universality in the average avalanche shape

Stefanos Papanikolaou, Felipe Bohn, Rubem L. Sommer +3

cond-mat.other2006

Digital Material: a flexible atomistic simulation code

Nicholas Bailey, Thierry Cretegny, James P. Sethna +5