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papers

Publications (25)

physics.acc-ph2013

Demonstration of Low Emittance in the Cornell Energy Recovery Linac Injector Prototype

Colwyn Gulliford, Adam Bartnik, Ivan Bazarov +13

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

Heng Li

physics.flu-dyn2018

Unified Flow and Thermal Law-of-the-wall for Type-A and B Turbulent Boundary Layers

Hongyi Xu, Duo Wang, Heng Li +1

Identifying the Best Machine Learning Algorithms for Brain Tumor Segmentation, Progression Assessment, and Overall Survival Prediction in the BRATS Challenge

Spyridon Bakas, Mauricio Reyes, Andras Jakab +421

physics.flu-dyn2019

Unified Flow and Thermal Law-of-the-wall Complete Formulations for Type-A Turbulent Boundary Layers

Duo Wang, Heng Li, Ting Yu +2

Identifying centromeric satellites with dna-brnn

Heng Li

Fast construction of FM-index for long sequence reads

Heng Li

The date of interbreeding between Neandertals and modern humans

Sriram Sankararaman, Nick Patterson, Heng Li +2

cond-mat.mtrl-sci2011

Creating and modulating electronic states on noble metal surfaces: ultrathin Ag islands on Si(111)-7$\times$7 as a prototype

Fang Cheng, Xiong Zhou, Yang He +6

FermiKit: assembly-based variant calling for Illumina resequencing data

Heng Li

Exploring single-sample SNP and INDEL calling with whole-genome de novo assembly

Heng Li

Learning to Collaborate: Multi-Scenario Ranking via Multi-Agent Reinforcement Learning

Jun Feng, Heng Li, Minlie Huang +4

Minimap and miniasm: fast mapping and de novo assembly for noisy long sequences

Heng Li

physics.acc-ph2017

Commissioning of te China-ADS injector-I testing facility

Fang Yan, Huiping Geng, Cai Meng +58

cond-mat.mes-hall2018

Giant, anomalous piezo-impedance of silicon-on-insulator

Heng Li, Christopher Tao-Kuan Lew, Brett Johnson +3

Correcting Illumina sequencing errors for human data

Heng Li

Minimap2: pairwise alignment for nucleotide sequences

Heng Li

No evidence that natural selection has been less effective at removing deleterious mutations in Europeans than in West Africans

Ron Do, Daniel Balick, Heng Li +3

cond-mat.mtrl-sci2016

Dynamics of Photo-excited Hot Carriers in Hydrogenated Amorphous Silicon Imaged by 4D Electron Microscopy

Bolin Liao, Ebrahim Najafi, Heng Li +2

BGT: efficient and flexible genotype query across many samples

Heng Li

Heterogeneity of Synaptic Input Connectivity Regulates Spike-based Neuronal Avalanches

Shengdun Wu, Yangsong Zhang, Yan Cui +7

Efficient Architecture-Aware Acceleration of BWA-MEM for Multicore Systems

Vasimuddin Md, Sanchit Misra, Heng Li +1

Towards Better Understanding of Artifacts in Variant Calling from High-Coverage Samples

Heng Li

Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM

Heng Li

Ancient human genomes suggest three ancestral populations for present-day Europeans

Iosif Lazaridis, Nick Patterson, Alissa Mittnik +117