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papers

Publications (49)

cond-mat.stat-mech2000

Symmetry and designability for lattice protein models

Tairan Wang, Jonathan Miller, Ned S. Wingreen +2

quant-ph2019

Efficient parametric frequency conversions in lithium niobate nanophotonic chips

Jia-yang Chen, Yong Meng Sua, Zhao-hui Ma +3

cond-mat.mes-hall2015

Two dimensional topological insulators with tunable band gaps: HgTe and HgSe monolayers

Jin Li, Chaoyu He, Lijun Meng +7

cond-mat.stat-mech2002

Flexibility of $α$-helices: Results of a statistical analysis of database protein structures

Eldon G. Emberly, Ranjan Mukhopadhyay, Ned S. Wingreen +1

cond-mat.stat-mech2000

Exact solution of stochastic directed sandpile model

Morten Kloster, Sergei Maslov, Chao Tang

cond-mat.stat-mech1997

Are Protein Folds Atypical?

Hao Li, Chao Tang, Ned S. Wingreen

physics.soc-ph2014

Community detection for networks with unipartite and bipartite structure

Chang Chang, Chao Tang

cond-mat.soft2003

Flexibility of beta-sheets: Principal-component analysis of database protein structures

Eldon G. Emberly, Ranjan Mukhopadhyay, Chao Tang +1

cond-mat.stat-mech1999

1/f Noise and Long Configuration Memory in Bak-Tang-Wiesenfeld Models on Narrow Stripes

Sergei Maslov, Chao Tang, Yi-Cheng Zhang

q-bio.MN2014

Generic Properties of Random Gene Regulatory Networks

Zhiyuan Li, Simone Bianco, Zhaoyang Zhang +1

cs.CV2018

30m resolution Global Annual Burned Area Mapping based on Landsat images and Google Earth Engine

Tengfei Long, Zhaoming Zhang, Guojin He +6

cond-mat.mtrl-sci2019

Stone-Wales graphene: A Two Dimensional Carbon Semi-Metal with Magic Stability

HengChuang Yin, Xizhi Shi, Chaoyu He +7

cond-mat.stat-mech1999

Simple Models of the Protein Folding Problem

Chao Tang

q-bio.MN2006

Stochastic Model of Yeast Cell Cycle Network

Yuping Zhang, Minping Qian, Qi Ouyang +3

cond-mat.soft2016

Dynamics of ellipsoidal tracers in swimming algal suspensions

Ou Yang, Yi Peng, Zhengyang Liu +3

cond-mat.stat-mech1997

Incommensurability in the Frustrated Two-Dimensional XY Model

Colin Denniston, Chao Tang

cond-mat.stat-mech1998

Designability, thermodynamic stability, and dynamics in protein folding: a lattice model study

Régis Mélin, Hao Li, Ned S. Wingreen +1

q-bio.MN2004

The Yeast Cell-Cycle Network Is Robustly Designed

Fangting Li, Tao Long, Ying Lu +2

physics.bio-ph2002

Structure Space of Model Proteins --A Principle Component Analysis

Mehdi Yahyanejad, Mehran Kardar, Chao Tang

q-bio.QM2004

Finding regulatory modules through large-scale gene-expression data analysis

Morten Kloster, Chao Tang, Ned Wingreen

cond-mat.mtrl-sci2014

Simple Cubic Carbon Phase C21-sc: A Promising Superhard Carbon Conductor

Chaoyu He, Lijun Meng, Chao Tang +1

q-bio.MN2006

Dynamic Studies of Scaffold-dependent Mating Pathway in Yeast

Danying Shao, Wen Zheng, Wenjun Qiu +2

cond-mat.soft2003

Origin of Scaling Behavior of Protein Packing Density: A Sequential Monte Carlo Study of Compact Long Chain Polymers

Jinfeng Zhang, Rong Chen, Chao Tang +1

cond-mat2003

Simulation and analysis of in vitro DNA evolution

Morten Kloster, Chao Tang

cond-mat1995

Peak Effect in Superconductors: Melting of Larkin Domains

Xinsheng Ling, Chao Tang, S. Bhattacharya +1

cond-mat1994

Dynamics of a Driven Single Flux Line in Superconductors

Colin Denniston, Chao Tang

cond-mat1995

Phases of Josephson Junction Ladders

Colin Denniston, Chao Tang

cond-mat1994

Self-Organized Criticality in Non-conserved Systems

A. Alan Middleton, Chao Tang

cond-mat.stat-mech1997

Low Energy Excitations and Phase Transitions in the Frustrated Two-Dimensional XY Model

Colin Denniston, Chao Tang

q-bio.BM2003

Correlation between sequence hydrophobicity and surface-exposure pattern of database proteins

Susanne Moelbert, Eldon Emberly, Chao Tang

cond-mat.stat-mech2001

Fast Tree Search for Enumeration of a Lattice Model of Protein Folding

Henry Cejtin, Jan Edler, Allan Gottlieb +5

cond-mat.stat-mech2002

The Designability of Protein Structures: A Lattice-Model Study using the Miyazawa-Jernigan Matrix

Hao Li, Chao Tang, Ned Wingreen

cond-mat.stat-mech2003

Statistical mechanics of RNA folding: importance of alphabet size

Ranjan Mukhopadhyay, Eldon Emberly, Chao Tang +1

cond-mat.stat-mech1997

Domain Walls and Phase Transitions in the Frustrated Two-Dimensional XY Model

Colin Denniston, Chao Tang

cond-mat1996

Why Do Proteins Look Like Proteins?

Hao Li, Robert Helling, Chao Tang +1

q-bio.MN2006

Robustness and modular design of the Drosophila segment polarity network

Wenzhe Ma, Luhua Lai, Qi Ouyang +1

cond-mat.stat-mech1998

Fractal Dimension of Julia Set for Non-analytic Maps

Chao Tang

cond-mat.stat-mech1997

Commensurability in One Dimension and the Josephson Junction Ladder

Colin Denniston, Chao Tang

physics.bio-ph2019

Growth strategy of microbes on mixed carbon sources

Xin Wang, Kang Xia, Xiaojing Yang +1

physics.med-ph2019

Projection Super-resolution Based on Convolutional Neural Network for Computed Tomography

Chao Tang, Wenkun Zhang, Ziheng Li +5

cond-mat.stat-mech2002

Designability of alpha-helical Proteins

Eldon Emberly, Ned Wingreen, Chao Tang

q-bio.MN2007

Function Constrains Network Architecture and Dynamics: A Case Study on the Yeast Cell Cycle Boolean Network

Kai-Yeung Lau, Surya Ganguli, Chao Tang

cond-mat.stat-mech2003

Designability and Thermal Stability of Protein Structures

Ned Wingreen, Hao Li, Chao Tang

cond-mat1995

Nature of Phase Transitions of Superconducting Wire Networks in a Magnetic Field

X. S. Ling, M. J. Higgins, Chao Tang +8

cond-mat.mtrl-sci2018

Complex low energy tetrahedral polymorphs of group IV elements from first-principles

Chaoyu He, Xizhi Shi, S. J. Clark +6

cond-mat.mtrl-sci2015

Direct and quasi-direct band gap silicon allotropes with remarkable stability

Chaoyu He, Jin Li, xiangyang Peng +3

cond-mat.stat-mech1997

Nature of Driving Force for Protein Folding -- A Result From Analyzing the Statistical Potential

Hao Li, Chao Tang, Ned Wingreen

q-bio.BM2005

Specificity of Trypsin and Chymotrypsin: Loop Motion Controlled Dynamic Correlation as a Determinant

Wenzhe Ma, Chao Tang, Luhua Lai

cond-mat.soft2001

Identifying Proteins of High Designability via Surface-Exposure Patterns

Eldon G. Emberly, Jonathan Miller, Chen Zeng +2