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papers

Publications (72)

physics.bio-ph2012

Solitons and Collapse in the lambda-repressor protein

Andrey Krokhotin, Martin Lundgren, Antti J. Niemi

hep-th1996

Knots and Particles

L. Faddeev, Antti J. Niemi

hep-th2003

Are Glueballs Knotted Closed Strings?

Antti J. Niemi

hep-ph2004

Glueballs, closed fluxtubes and eta(1440)

Ludvig Faddeev, Antti J. Niemi, Ulrich Wiedner

hep-th2003

Can Renormalization Group Flow End in a Big Mess?

Alexei Morozov, Antti J. Niemi

q-bio.BM2017

Virtual reality analysis of intrinsic protein geometry with applications to cis peptide planes

Yanzhen Hou, Jin Dai, Nevena Ilieva +3

physics.plasm-ph2000

Magnetic Geometry and the Confinement of Electrically Conducting Plasmas

Ludvig Faddeev, Antti J. Niemi

hep-th2006

Spin-Charge Separation, Conformal Covariance and the SU(2) Yang-Mills Theory

Ludvig D. Faddeev, Antti J. Niemi

cond-mat.supr-con2002

Hidden symmetry and knot solitons in a charged two-condensate Bose system

Egor Babaev, Ludvig D. Faddeev, Antti J. Niemi

hep-th2010

On Solutions to the "Faddeev-Niemi" Equations

Antti J. Niemi, Andrzej Wereszczynski

quant-ph2006

Spin-Charge Separation and the Pauli Electron

M. N. Chernodub, Antti J. Niemi

cond-mat.soft2014

WHAT IS LIFE - Sub-cellular Physics of Live Matter

Antti J. Niemi

q-bio.BM2014

Aspects of structural landscape of human islet amyloid polypeptide

Jianfeng He, Jin Dai, Jing Li +2

physics.bio-ph2011

Soliton concepts and the protein structure

Andrei Krokhotin, Antti J. Niemi, Xubiao Peng

hep-th1999

Aspects of Duality and Confining Strings

Mauri Miettinen, Antti J. Niemi, Yuri Stroganov

hep-th2004

Dual Superconductors and SU(2) Yang-Mills

Antti J. Niemi

cond-mat.supr-con2006

Topological aspects of dual superconductors

Soon-Tae Hong, Antti J. Niemi

math-ph2014

Gauge field, strings, solitons, anomalies and the speed of life

Antti J. Niemi

hep-th2009

On Lorentz Invariance, Spin-Charge Separation And SU(2) Yang-Mills Theory

Antti J. Niemi, Sergey Slizovskiy

physics.bio-ph2012

On the role of thermal backbone fluctuations in myoglobin ligand gate dynamics

Andrey Krokhotin, Antti J. Niemi, Xubiao Peng

q-bio.BM2016

Towards multistage modelling of protein dynamics with monomeric Myc oncoprotein as an example

Jiaojiao Liu, Jin Dai, Jianfeng He +2

q-bio.BM2010

Towards Quantitative Classification of Folded Proteins in Terms of Elementary Functions

Shuangwei Hu, Andrei Krokhotin, Antti J. Niemi +1

hep-ph2005

Could Spin-Charge Separation be the Source of Confinement?

Antti J. Niemi

hep-th2005

Yang-Mills, Complex Structures and Chern's Last Theorem

Andrei Marshakov, Antti J. Niemi

hep-th1999

Towards a string representation of infrared SU(2) Yang-Mills theory

Edwin Langmann, Antti J. Niemi

physics.bio-ph2010

Topological Solitons and Folded Proteins

M. N. Chernodub, Shuangwei Hu, Antti J. Niemi

hep-th1996

Topological Sigma-model, Hamiltonian Dynamics and Loop Space Lefschetz Number

Antti J. Niemi, Pirjo Pasanen

hep-th2003

Three Dimensional Gravity From SU(2) Yang-Mills Theory in Two Dimensions

Antti J. Niemi

hep-th1994

Equivariance, BRST and Superspace

Antti J. Niemi, O. Tirkkonen

hep-th1995

Quantum Mechanical Anomalies and the De Witt Effective Action

Topi Kärki, Antti J. Niemi

hep-th1999

Decomposing the Yang-Mills Field

Ludvig Faddeev, Antti J. Niemi

physics.bio-ph2011

The protein dynamical transition is a pseudogap changeover

Andrey Krokhotin, Antti J. Niemi

hep-th2010

On Relations Between Electroweak Hierarchy Problem, Fluctuating Three Branes And General Covariance

Antti J. Niemi, Sergey Slizovskiy

q-bio.BM2011

The Discrete Frenet Frame, Inflection Point Solitons And Curve Visualization with Applications to Folded Proteins

Shuangwei Hu, Martin Lundgren, Antti J. Niemi

physics.bio-ph2011

Soliton driven relaxation dynamics and universality in protein collapse

Andrey Krokhotin, Martin Lundgren, Antti J. Niemi

q-bio.BM2014

Virtual reality based approach to protein heavy-atom structure reconstruction

Xubiao Peng, Alireza Chenani, Shuangwei Hu +2

cond-mat.stat-mech2004

The Exotic Statistics of Leapfrogging Smoke Rings

Antti J. Niemi

hep-ph2009

Baryon number violation and a new electroweak interaction

M. N. Chernodub, Antti J. Niemi

cond-mat.soft2009

Knots and Swelling in Protein Folding

Martin Lundgren, Antti J. Niemi

q-bio.BM2015

Bloch spin waves and emergent structure in protein folding with HIV envelope glycoprotein as an example

Jin Dai, Antti J. Niemi, Jianfeng He +2

hep-th1998

Partially Dual variables in SU(2) Yang-Mills Theory

Ludvig Faddeev, Antti J. Niemi

physics.bio-ph2012

Protein loops, solitons and side-chain visualization with applications to the left-handed helix region

Martin Lundgren, Antti J. Niemi, Fan Sha

cond-mat.stat-mech2010

Elastic Energy and Phase Structure in a Continuous Spin Ising Chain with Applications to the Protein Folding Problem

M. N. Chernodub, Martin Lundgren, Antti J. Niemi

hep-th2005

BRST extension of the Faddeev model

Soon-Tae Hong, Antti J. Niemi

hep-th1996

Aspects of mass gap, confinement and N=2 structure in 4-D Yang-Mills theory

Jussi Kalkkinen, Antti J. Niemi

physics.plasm-ph2000

Shafranov's virial theorem and magnetic plasma confinement

Ludvig Faddeev, Lisa Freyhult, Antti J. Niemi +1

hep-th1995

On the number of periodic classical trajectories in a Hamiltonian dynamical system

Antti J. Niemi

hep-th2008

Non-Abelian Supercurrents and de Sitter Ground State in Electroweak Theory

M. N. Chernodub, Ludvig Faddeev, Antti J. Niemi

q-bio.BM2016

Thermal unfolding of myoglobin in the Landau-Ginzburg-Wilson approach

Xubiao Peng, Adam Sieradzan, Antti J. Niemi

hep-th2001

Aspects of Electric and Magnetic Variables in SU(2) Yang-Mills Theory

Ludvig Faddeev, Antti J. Niemi

physics.bio-ph2012

On correlation between protein secondary structure, backbone bond angles, and side-chain orientations

Martin Lundgren, Antti J. Niemi

hep-ph2005

Splitting The Gluon?

Antti J. Niemi, Niels R. Walet

cond-mat.stat-mech2010

A Gauge Field Theory of Chirally Folded Homopolymers with Applications to Folded Proteins

Ulf H. Danielsson, Martin Lundgren, Antti J. Niemi

hep-th1999

Partial duality in SU(N) Yang-Mills theory

L. Faddeev, Antti J. Niemi

hep-ph1995

Gauge Vector Masses from Flat Connections?

Antti J. Niemi

hep-ph2008

Embedding Brans-Dicke gravity into electroweak theory

M. N. Chernodub, Antti J. Niemi

q-bio.BM2011

Solitons and Physics of the Lysogenic to Lytic Transition in Enterobacteria Lambda Phage

Andrei Krokhotine, Antti J. Niemi

hep-th2002

Chirality and fermion number in a knotted soliton background

Lisa Freyhult, Antti J. Niemi

q-bio.BM2011

Covalent bond symmetry breaking and protein secondary structure

Martin Lundgren, Antti J. Niemi

q-bio.BM2011

Protein Regge Trajectories, Phase Coexistence and Physics of Alzheimer's Disease

Andrei Krokhotin, Antti J. Niemi

hep-th2012

On Energy Functions for String-Like Continuous Curves, Discrete Chains, and Space-Filling One Dimensional Structures

Shuangwei Hu, Ying Jiang, Antti J. Niemi

hep-th2002

Phases of bosonic strings and two dimensional gauge theories

Antti J. Niemi

hep-th2014

On spinors, strings, integrable models and decomposed Yang-Mills theory

Theodora Ioannidou, Ying Jiang, Antti J. Niemi

hep-th2001

Field Theories from Bundles of Strings

Sazzad Nasir, Antti J. Niemi

hep-th1992

Cohomological Partition Functions for a Class of Bosonic Theories

Antti J. Niemi, O. Tirkkonen

hep-th1999

(Meta)stable closed vortices in 3+1 dimensional gauge theories with an extended Higgs sector

Antti J. Niemi, Kaupo Palo, Sami Virtanen

hep-th1999

Knots in interaction

Antti J. Niemi

q-bio.BM2011

On universal aspects of the left-handed helix region

Martin Lundgren, Antti J. Niemi, Fan Sha

physics.bio-ph2013

Long range correlations and folding angle in polymers with applications to α-helical proteins

Andrey Krokhotin, Stam Nicolis, Antti J. Niemi

cond-mat.mes-hall2014

Leapfrogging vortex rings in the Landau-Lifshitz equation

Antti J. Niemi, Paul Sutcliffe

hep-th2010

Re-dressing Emperor: Four Dimensional Yang-Mills Theory, Gauge Invariant Mass And Fluctuating Three Branes

Antti J. Niemi, Sergey Slizovskiy

hep-th1999

On the Arnold Conjecture and the Atiyah-Patodi-Singer Index Theorem

Mauri Miettinen, Antti J. Niemi